The detailed information of tRNA gene sequence


Sequence ID>WENV170555263
Genome IDCXWK01099470
Search identical group
Phylum/Class[CXWK] wastewater metagenome; activated sludge
Species
Start position on genome 9463
End posion on genome 9556
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctcgtaaat
tRNA gene sequence 
GGAAGATTGACAGAGTTTGGTATTGTGCCTGCTTGGAAAGCAGAGTCCTAGCCCGAAAGG
GGTAGCAAAGGTTCAAATCCTTTATCTTCTACCG
Downstream region at tRNA end position 
ttaggttttg
Secondary structure (Cloverleaf model)
>WENV170555263	Ser	GGA
                   t      ACCG ttaggttttg
                     G + T
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A          T A
                    T     T T T C C     A
      T G A        G      | | | | |     A
    T       G A C A       A A A G G     C
    T       + | | |                 T T
    G       T T G T
      G T A        G     GTCCTAGCCCGAAAGGGGTAGC
                    C   A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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