The detailed information of tRNA gene sequence


Sequence ID>WENV170560753
Genome IDCZCA01000362
Search identical group
Phylum/Class[CZCA] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 7772
End posion on genome 7861
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaatatcagc
tRNA gene sequence 
GGAGAGTTGCCGGAGCGGTTGATCGGGGCGGTCTCGAAAACCGTTGTACCTTTGCGGGTA
CCCAGGGTTCGAATCCCTGACTCTCCGCCA
Downstream region at tRNA end position 
ttttattagc
Secondary structure (Cloverleaf model)
>WENV170560753	Ser	CGA
                   c      GCCA ttttattagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G       + | | |                 T T
    T       T C G G
      T G A        G     TGTACCTTTGCGGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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