The detailed information of tRNA gene sequence


Sequence ID>WENV170561172
Genome IDCZCA01003750
Search identical group
Phylum/Class[CZCA] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 8772
End posion on genome 8868
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
acaatgaagg
tRNA gene sequence 
gCGGGGAGGGATGTGTCCCGGTGGACGCCCCGGTCTTCAAAACCGGTGGCAGGTGGCGCG
GAGCCGGCTGCGGTGGGTTCGACTCCCACGCCTTCCCGtaaaa
Downstream region at tRNA end position 
cgtctatgcc
Secondary structure (Cloverleaf model)
>WENV170561172	SeC(p)	TCA
                   g      aaaa cgtctatgcc
                     g + t
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     G - C          C C
                    G     C G C A C     T
    C C T G        G      |   | |       C
  C         T G T A       G G G T T     A
  G         | | +                   C G
  G         A C G C
    T G G          C     TGGCAGGTGGCGCGGAGCCGGCTGCGGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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