The detailed information of tRNA gene sequence


Sequence ID>WENV170561728
Genome IDCZCA01024157
Search identical group
Phylum/Class[CZCA] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 685
End posion on genome 773
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gataaaaagt
tRNA gene sequence 
GGAGAGATGACCGAGTTGGCGAAGGGACATGCCTGGAAAGCGTGTAAGGTCGAAAGGCCC
CGTGGGTTCGAGTCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
ttagaaaatt
Secondary structure (Cloverleaf model)
>WENV170561728	Ser	GGA
                   t      GCCA ttagaaaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T G
                    T     C A C C C     A
      T G A        G      | | | | |     G
    T       G C C A       G T G G G     C
    G         | |                   T T
    G       A G G G
      C G A        A     TAAGGTCGAAAGGCCCC
                    C - G
                    A - T
                    T + G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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