The detailed information of tRNA gene sequence


Sequence ID>WENV170561774
Genome IDCZCB01000030
Search identical group
Phylum/Class[CZCB] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 53494
End posion on genome 53404
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taaagcgagt
tRNA gene sequence 
GGAGAAGTACCGAAGTGGTCATAACGGGGCGCACTCGAAATGCGTTTGACGATTATTCGT
CACGGGGGTTCGAATCCTCTCTTCTCCGCCA
Downstream region at tRNA end position 
ccaagacaca
Secondary structure (Cloverleaf model)
>WENV170561774	Ser	CGA
                   t      GCCA ccaagacaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T C T C C     A
    G T G A        A      + | + | |     G
  G         A G C C       G G G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TTGACGATTATTCGTCAC
                    G + T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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