The detailed information of tRNA gene sequence


Sequence ID>WENV170562289
Genome IDCZCB01001996
Search identical group
Phylum/Class[CZCB] anaerobic digester metagenome; anaerobic digester
Species
Start position on genome 2957
End posion on genome 2861
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gaacttgttt
tRNA gene sequence 
GGGGGCGGATTGTGACTGGTGTTGCGCCTGGTCTTCAAAACCAGTGTGGCGGAGTGCTCC
TCCGCTGGGTGGGTTCGATTCCCACACGCTCCCGCCA
Downstream region at tRNA end position 
attgtgttaa
Secondary structure (Cloverleaf model)
>WENV170562289	SeC(p)	TCA
                   t      GCCA attgtgttaa
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C A        T      | | | | |     G
    G       G T G T       G T G G G     C
    G       + + | +                 T T
    T       T G C G
      G T          C     TGTGGCGGAGTGCTCCTCCGCTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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