The detailed information of tRNA gene sequence


Sequence ID>WENV170564432
Genome IDCZKO01000105
Search identical group
Phylum/Class[CZKO] soil metagenome genome assembly CiPEHR-AK-2010-FBin.10, contig:; soil
Species
Start position on genome 16366
End posion on genome 16457
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tatatcgcat
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTCGAAGGCGCTGGACTGGAATTCCAGTAACATCTTCACGGGT
GTTCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
caggtccacg
Secondary structure (Cloverleaf model)
>WENV170564432	Ser	GGA
                   t      GCCA caggtccacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAACATCTTCACGGGTGTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       T
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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