The detailed information of tRNA gene sequence


Sequence ID>WENV170564617
Genome IDCZKT01000024
Search identical group
Phylum/Class[CZKT] soil metagenome genome assembly CiPEHR-AK-2010-FBin.14, contig:; soil
Species
Start position on genome 4383
End posion on genome 4478
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ggtcagctgc
tRNA gene sequence 
GGAGGCGTCCGGGTGCCTGGTGGCCCCCCCGGTCTTCAAAACCGGTGGACGGCGCGCTGC
GTCGTCGGCGGGTTCGATTCCCGTCCGCCTCCGCCA
Downstream region at tRNA end position 
cgccgctaga
Secondary structure (Cloverleaf model)
>WENV170564617	SeC(p)	TCA
                   c      GCCA cgccgctaga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C G        C      + | | | |     G
    T       T G G G       G C G G G     C
    G         | | |                 T T
    G       C C C C
      T G G        C     TGGACGGCGCGCTGCGTCGTCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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