The detailed information of tRNA gene sequence


Sequence ID>WENV170577238
Genome IDFRDC01004093
Search identical group
Phylum/Class[FRDC] freshwater metagenome; water
Species
Start position on genome 9306
End posion on genome 9403
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gttattcgtt
tRNA gene sequence 
GGACCGATTGTCTAGTTGGTTAGGATGACGCACTCACACTGCGTAAGGATGGAATCATCC
CGCAAGGGTCGTGGGTTCGAATCCCACTCGGTCCACCT
Downstream region at tRNA end position 
cttattatat
Secondary structure (Cloverleaf model)
>WENV170577238	Val	CAC
                   t      ACCT cttattatat
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        T      | | | | |     G
    T       T C T G       G T G G G     C
    G       + | | +                 T T
    G       G G A T
      T T A        G     AAGGATGGAATCATCCCGCAAGGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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