The detailed information of tRNA gene sequence


Sequence ID>WENV170636992
Genome IDJFBN01307345
Search identical group
Phylum/Class[JFBN] chicken gut metagenome; ceca of Broiler chicken
Species
Start position on genome 62685
End posion on genome 62782
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttatcacttt
tRNA gene sequence 
GGAAGATTAGCGTATCTGGTGATCGCCACTGACTTCAAATCAGATGAAAGGATAGTTGAC
TATTCTTTGGGGAGTTCGATTCTCTCATCTTCTCGCC
Downstream region at tRNA end position 
Aatattaagt
Secondary structure (Cloverleaf model)
>WENV170636992	SeC	TCA
                   t      CGCC Aatattaagt
                     G + T
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A          T T
                    T     C T C T C     A
      C T A        A      | + | | |     G
    T       T G C G       G G G A G     C
    G         | | |                 T T
    G       T C G C
      T G A        C     TGAAAGGATAGTTGACTATTCTTTG
                    A   A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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