The detailed information of tRNA gene sequence


Sequence ID>WENV170638176
Genome IDJFBN01432870
Search identical group
Phylum/Class[JFBN] chicken gut metagenome; ceca of Broiler chicken
Species
Start position on genome 13342
End posion on genome 13430
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gagcatatag
tRNA gene sequence 
GGAGCGGTATCGAAGTGGTCATAACGGGCCTGACTCGAAATCAGGTAGTCCTCACGGGCT
CGTGGGTTCGAATCCCACCCGCTCCGCCA
Downstream region at tRNA end position 
tcgaaaaatc
Secondary structure (Cloverleaf model)
>WENV170638176	Ser	CGA
                   g      GCCA tcgaaaaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C T       G T G G G     C
  T           | | +                 T T
  C         A C G G
    A T A          G     TAGTCCTCACGGGCTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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