The detailed information of tRNA gene sequence


Sequence ID>WENV170639007
Genome IDJFBN01610686
Search identical group
Phylum/Class[JFBN] chicken gut metagenome; ceca of Broiler chicken
Species
Start position on genome 307
End posion on genome 220
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATTGCGGCGGTCTTGAAAACCGTTGTACTGCGAGGTACC
GGGGGTTCGAATCCCTCCCTCTCCGCAA
Downstream region at tRNA end position 
aaaacaatca
Secondary structure (Cloverleaf model)
>WENV170639007	Ser	TGA
                   n      GCAA aaaacaatca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGTACTGCGAGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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