The detailed information of tRNA gene sequence


Sequence ID>WENV170639533
Genome IDJFJP01004201
Search identical group
Phylum/Class[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
Species
Start position on genome 2458
End posion on genome 2382
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcggacttga
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGAAGGTTCAAA
TCCTTCCCCCGCAACCA
Downstream region at tRNA end position 
aacaaaaaat
Secondary structure (Cloverleaf model)
>WENV170639533	Met	CAT
                   a      ACCA aacaaaaaat
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G A A G G     C
    T       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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