The detailed information of tRNA gene sequence


Sequence ID>WENV170639635
Genome IDJFJP01005507
Search identical group
Phylum/Class[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
Species
Start position on genome 18139
End posion on genome 18213
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ttgaggcttc
tRNA gene sequence 
GGGCGGTTAGCTCAGTGGTAGAGCACTGCCTTCACACGGCAGGGGTCGCAGGTTCGAACC
CTGCACCGCCCACCA
Downstream region at tRNA end position 
aaatttgtgt
Secondary structure (Cloverleaf model)
>WENV170639635	Val	CAC
                   c      ACCA aaatttgtgt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C A
                    T     C G T C C     A
        G A        A      | | | | |     G
      T     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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