The detailed information of tRNA gene sequence


Sequence ID>WENV170643608
Genome IDJMBV01000004
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 43320
End posion on genome 43395
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gatagggaaa
tRNA gene sequence 
CGGAGCGTAGCGCAGTTGGGAGCGCGCCGGTCTTGGGCACCGGAGGTCGCTGGTTCAAAT
CCAGTCGCTCCGACCA
Downstream region at tRNA end position 
tttttgttgc
Secondary structure (Cloverleaf model)
>WENV170643608	Pro	TGG
                   a      ACCA tttttgttgc
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T G A C C     A
      T G A        A      + | | | |     A
    T       C G C G       G C T G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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