The detailed information of tRNA gene sequence


Sequence ID>WENV170643612
Genome IDJMBV01000004
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 60568
End posion on genome 60496
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tcacgatggc
tRNA gene sequence 
CCCCCCATAGGATAATGGTTAGTCCATTGGATTCTCAGTCCAAGAGTCAGGGTTCGATTC
CCTGTGGGGGGGCtg
Downstream region at tRNA end position 
ccaccccccc
Secondary structure (Cloverleaf model)
>WENV170643612	Glu	CTC
                   c      GCtg ccaccccccc
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G T C C C     A
      T A A        A      | | | | |     G
    G       T A G G       C A G G G     C
    G       + | | |                 T T
    T       G T C C
      T A          A     GAGT
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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