The detailed information of tRNA gene sequence


Sequence ID>WENV170643617
Genome IDJMBV01000007
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 2558
End posion on genome 2480
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ccatttctat
tRNA gene sequence 
GCTGGCGTGGCTCAGTTGGCAGAGCGGTTGATTCGTAATCAACAGGTCAGGGGGGGTTCG
ACTCCCCTCGCCAGCTCCA
Downstream region at tRNA end position 
ttattaagaa
Secondary structure (Cloverleaf model)
>WENV170643617	Thr	CGT
                   t      TCCA ttattaagaa
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T C
                    T     T C C C C     A
      T G A        G      + | | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTCAGG
                    G - C
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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