The detailed information of tRNA gene sequence


Sequence ID>WENV170643628
Genome IDJMBV01000011
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 15159
End posion on genome 15236
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
taagtcattg
tRNA gene sequence 
TGCCCCATCGTCTAGCGGCCTAGGACACCGCCCTTTCACGGCGAAGGCACCGGTTCAAAT
CCGGTTGGGGGGGTACCA
Downstream region at tRNA end position 
ttttacgggc
Secondary structure (Cloverleaf model)
>WENV170643628	Glu	TTC
                   g      ACCA ttttacgggc
                     T   T
                     G   G
                     C - G
                     C - G
                     C - G
                     C - G
                     A   G          C C
                    T     G T T G G     T
      C G A        C      | + + + +     A
    G       T C T G       C G G T T     A
    G       + | | |                 C A
    C       G G A C
      C T A        A     AGGCAC
                    C   A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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