The detailed information of tRNA gene sequence


Sequence ID>WENV170643629
Genome IDJMBV01000011
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 15243
End posion on genome 15318
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
accattttac
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGGAGAGCGCTTGAATGGCATTCAAGAGGCCGTCGGTTCGATT
CCGTCTGGGTCCACCA
Downstream region at tRNA end position 
tctgagaaac
Secondary structure (Cloverleaf model)
>WENV170643629	Ala	GGC
                   c      ACCA tctgagaaac
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     C T G C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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