The detailed information of tRNA gene sequence


Sequence ID>WENV170643631
Genome IDJMBV01000011
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 78726
End posion on genome 78806
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcaaacggcG
tRNA gene sequence 
CGGGGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTTGTCGGTTCAA
ATCCGGCCCCCCCGCAACCA
Downstream region at tRNA end position 
atttttcaaa
Secondary structure (Cloverleaf model)
>WENV170643631	Met	CAT
                   G      ACCA atttttcaaa
                     C   A
                     G - C
                     G   G
                     G - C
                     G - C
                     G - C
                     G - C          C C
                    G     C C C G G     T
    T G A C        T        | | + +     A
  C         G A G G       C G G T T     A
  T             + |                 C A
  G         G C T C
    G T A          G     AGGTTGT
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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