The detailed information of tRNA gene sequence


Sequence ID>WENV170643642
Genome IDJMBV01000022
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 18526
End posion on genome 18600
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
agcatagaaa
tRNA gene sequence 
GGGCGCTTAGCTCAGTGGGAGAGCGTCTGCTTCACGCGCAGAAGGTCGTAGGTTCAAGTC
CTACAGCGCCCACCA
Downstream region at tRNA end position 
atttcttatc
Secondary structure (Cloverleaf model)
>WENV170643642	Val	CAC
                   a      ACCA atttcttatc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          T G
                    T     C A T C C     A
        G A        A      | | | | |     A
      T     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       G
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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