The detailed information of tRNA gene sequence


Sequence ID>WENV170643646
Genome IDJMBV01000023
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 48367
End posion on genome 48450
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttcacatttt
tRNA gene sequence 
CGGGATGTAGCTCAGTCCGGTTTAGAGTACGCGTCTGGGGGGGGCGTGGGGGGGTCGGAA
GTTCGAATCTTCTCATCCCGACAA
Downstream region at tRNA end position 
aaacagtcaa
Secondary structure (Cloverleaf model)
>WENV170643646	Pro	GGG
                   t      ACAA aaacagtcaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C T T C     A
    C T G A        A      + | | | |     G
  C         C T C G       G G A A G     C
  G         | | | +                 T T
  G         G A G T
    T T T A        A     TGGGGGGGTC
                    C - G
                    G - C
                    C - G
                    G   G
                    T + G
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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