The detailed information of tRNA gene sequence


Sequence ID>WENV170643653
Genome IDJMBV01000031
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 19845
End posion on genome 19771
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gtgtgttgac
tRNA gene sequence 
GGGCGCTTAGCTCAGTGGGAGAGCGTCTGCCTTACAAGCAGAAGGTCGTAGGTTCAAGTC
CTGCAGCGCCCACCA
Downstream region at tRNA end position 
tcctcttttt
Secondary structure (Cloverleaf model)
>WENV170643653	Val	TAC
                   c      ACCA tcctcttttt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          T G
                    T     C G T C C     A
        G A        A      | + | | |     A
      T     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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