The detailed information of tRNA gene sequence


Sequence ID>WENV170643657
Genome IDJMBV01000035
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 10850
End posion on genome 10939
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atccaactac
tRNA gene sequence 
GGAGAGGTGACCGAGTGGCCGAAGGTGCTTGCCTGCTAAGCAAGTGTAGAGGTAACTCTA
CCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ttgtttattg
Secondary structure (Cloverleaf model)
>WENV170643657	Ser	GCT
                   c      GCCA ttgtttattg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTAGAGGTAACTCTACC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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