The detailed information of tRNA gene sequence


Sequence ID>WENV170643660
Genome IDJMBV01000043
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 16071
End posion on genome 16145
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ctcgcgccgg
tRNA gene sequence 
GGGGGTGTGGCGCAGACGGCTAGCGCGCTGCGTTTGGGACGCAGAGGTCGTCGGTTCAAG
TCCGACCACCCCGACtt
Downstream region at tRNA end position 
tttttgttta
Secondary structure (Cloverleaf model)
>WENV170643660	Pro	TGG
                   g      ACtt tttttgttta
                     G   G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C A G C C     A
      A G A        G      | | | | |     A
    C       C G C G       G T C G G     C
    G       | | | |                 T T
    G       G C G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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