The detailed information of tRNA gene sequence


Sequence ID>WENV170643665
Genome IDJMBV01000052
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 250
End posion on genome 173
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tttatggcgg
tRNA gene sequence 
GGGGGCGTGGCGCAGTTTGGCTAGCGCGCCTGCCTTGGGAGCAGGAGGCCGGAGGTTCAA
ATCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tttttgcggg
Secondary structure (Cloverleaf model)
>WENV170643665	Pro	TGG
                   g      ACCA tttttgcggg
                     G   G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    T T G A        G      + | | | |     A
  T         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    C T A          G     AGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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