The detailed information of tRNA gene sequence


Sequence ID>WENV170643672
Genome IDJMBV01000075
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 24959
End posion on genome 25049
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ataatattaa
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCGCACGCCTGGAGAGCGTGTGACGGTTAAAAGCTG
TCCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gaagaagtaa
Secondary structure (Cloverleaf model)
>WENV170643672	Ser	GGA
                   a      GCCA gaagaagtaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TGACGGTTAAAAGCTGTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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