The detailed information of tRNA gene sequence


Sequence ID>WENV170643674
Genome IDJMBV01000076
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 30814
End posion on genome 30890
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gctactcggg
tRNA gene sequence 
GGGGGCGTGGTGTAGCGGTTTAACATGCGGCCCTGTCAAGGCCGAGATCGCGGGTTCAAA
TCCCGTCGCTCCCGCCA
Downstream region at tRNA end position 
aaaaaaagct
Secondary structure (Cloverleaf model)
>WENV170643674	Asp	GTC
                   g      GCCA aaaaaaagct
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
      C G A        G      + | | | |     A
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      T T A        G     AGATC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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