The detailed information of tRNA gene sequence


Sequence ID>WENV170643677
Genome IDJMBV01000087
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 13704
End posion on genome 13628
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gtgtattaat
tRNA gene sequence 
TCTTCAGTAGCTCAGTCGGTTAGAGCATCTGACTGTTAATCAGAGGGTCGCTGGTTCAAG
TCCAGCCTGAAGAGCAA
Downstream region at tRNA end position 
aaaaaacgag
Secondary structure (Cloverleaf model)
>WENV170643677	Asn	GTT
                   t      GCAA aaaaaacgag
                     T - A
                     C - G
                     T - A
                     T - A
                     C - G
                     A - T
                     G - C          T G
                    T     C G A C C     A
      T G A        A      | | | | |     A
    C       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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