The detailed information of tRNA gene sequence


Sequence ID>WENV170643682
Genome IDJMBV01000098
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 14010
End posion on genome 14090
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgtagtggcG
tRNA gene sequence 
CGGGGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTTGTCGGTTCGA
ATCCGGCCCCCCCGCAACCA
Downstream region at tRNA end position 
tgcatgctaa
Secondary structure (Cloverleaf model)
>WENV170643682	Met	CAT
                   G      ACCA tgcatgctaa
                     C   A
                     G - C
                     G   G
                     G - C
                     G - C
                     G - C
                     G - C          C C
                    G     C C C G G     T
    T G A C        T        | | + +     A
  C         G A G G       C G G T T     A
  T             + |                 C G
  G         G C T C
    G T A          G     AGGTTGT
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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