The detailed information of tRNA gene sequence


Sequence ID>WENV170643689
Genome IDJMBV01000127
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 5451
End posion on genome 5364
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
taattcagtc
tRNA gene sequence 
GCGCGAGTGGCGGAACTGGCAGACGCGCAGGACTTAGAATCCTGTGGATGAATAATCCGT
GTGGGTTCAAGTCCCACCTCGCGCACCA
Downstream region at tRNA end position 
ctctatatat
Secondary structure (Cloverleaf model)
>WENV170643689	Leu	TAG
                   c      ACCA ctctatatat
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          T G
                    T     C A C C C     A
      C A A        G      | | | | |     A
    T       G G C G       G T G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGGATGAATAATCCGT
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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