The detailed information of tRNA gene sequence


Sequence ID>WENV170643692
Genome IDJMBV01000136
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 26677
End posion on genome 26766
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caaaatgcag
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATCGCGGCGGTCTTGAAAACCGTTGAACTGAGAGGTTCC
GGGGGGGTTCGAATCCCTCTCTCTCCGCGA
Downstream region at tRNA end position 
aaatgtttga
Secondary structure (Cloverleaf model)
>WENV170643692	Ser	TGA
                   g      GCGA aaatgtttga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       +   | |                 T T
    T       T C G C
      C G A        G     TGAACTGAGAGGTTCCGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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