The detailed information of tRNA gene sequence


Sequence ID>WENV170643694
Genome IDJMBV01000149
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 19534
End posion on genome 19625
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tatttaaact
tRNA gene sequence 
GGAGAGATGTCCGAGAGGTTTAAGGTGGTAGTCTCGAAAACTATTGCGCAGTTTAGGCTG
TGCCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gttttatttt
Secondary structure (Cloverleaf model)
>WENV170643694	Ser	CGA
                   t      GCCA gttttatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | |                   T T
    T       A G G T
      T T A        G     TGCGCAGTTTAGGCTGTGCC
                    G + T
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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