The detailed information of tRNA gene sequence


Sequence ID>WENV170643695
Genome IDJMBV01000163
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 5443
End posion on genome 5365
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaaacgacgg
tRNA gene sequence 
GGGGGTGTAGCGCAGTTTGGTAGCGCACGTGGTTTGGGACCATGGGGGGGCCGGGGTTCA
AATCCTCTCACCCCCCCGA
Downstream region at tRNA end position 
ccatcgacaa
Secondary structure (Cloverleaf model)
>WENV170643695	Pro	TGG
                   g      CCGA ccatcgacaa
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      T G A        A        | + | |     A
    T       C G C G       C G G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGGGGC
                    C - G
                    G + T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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