The detailed information of tRNA gene sequence


Sequence ID>WENV170643697
Genome IDJMBV01000178
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 3778
End posion on genome 3701
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cggctcacgg
tRNA gene sequence 
GGGGGCGTGGCTCAGCCCGGAGAGAGCGCTCGGTTCGGGACCGAGAGGTCGGCAGTTCAA
ATCTGCTCGCCCCCCCGA
Downstream region at tRNA end position 
caaaagacag
Secondary structure (Cloverleaf model)
>WENV170643697	Pro	CGG
                   g      CCGA caaaagacag
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C G T C     A
    C C G A        G      + | | | |     A
  C         C T C G       G G C A G     C
  G         | | | |                 T T
  G         G A G C
    A G A          G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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