The detailed information of tRNA gene sequence


Sequence ID>WENV170643701
Genome IDJMBV01000182
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 23738
End posion on genome 23651
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position
aaacgtccag
tRNA gene sequence
GCCGAAGTGGCGGAATTGGCAGACGCGCTACGTTCAGGGCGTAGTGGGCACAGTGCTCGT
GAGGGTTCAAGTCCCTCCTTCGGCATCA
Downstream region at tRNA end position
acaaatcagt
Secondary structure (Cloverleaf model)
>WENV170643701	Leu	CAG
                   g      ATCA acaaatcagt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGGGCACAGTGCTCGT
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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