The detailed information of tRNA gene sequence


Sequence ID>WENV170643706
Genome IDJMBV01000201
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 21305
End posion on genome 21381
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ttaatatgtg
tRNA gene sequence 
GTGGATGTGGCCTAGTTGGTTAGGGCGCCAGATTGTGGCTCTGGAGGTCGTGGGTTCGAA
TCCCATCATCCACCCCA
Downstream region at tRNA end position 
ttatattttt
Secondary structure (Cloverleaf model)
>WENV170643706	His	GTG
                   g      CCCA ttatattttt
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    T       T C C G       G T G G G     C
    G       + | | |                 T T
    G       G G G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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