The detailed information of tRNA gene sequence


Sequence ID>WENV170643709
Genome IDJMBV01000202
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 14421
End posion on genome 14493
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
catacaagaa
tRNA gene sequence 
GGCGCACTCTTCTAACGGTTAGGAAAATTGTTTCTCAGGCAATGAATAGCGGTTCGATTC
CGCTGTGCGCTACtt
Downstream region at tRNA end position 
tcgaaactta
Secondary structure (Cloverleaf model)
>WENV170643709	Glu	CTC
                   a      ACtt tcgaaactta
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     C - G          T T
                    T     T C G C C     A
      C A A        C      | | | | |     G
    G       T C T T       A G C G G     C
    G       + | | |                 T T
    T       G G A A
      T A          A     GAAT
                    A - T
                    T - A
                    T - A
                    G - C
                    T + G
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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