The detailed information of tRNA gene sequence


Sequence ID>WENV170643712
Genome IDJMBV01000213
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 13262
End posion on genome 13337
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ctcaaatcaa
tRNA gene sequence 
GCCACAATAGCTCAGTTGGTAGAGTAACGCATTCGTAACGCGTGGGTCGCGAGTTCAAGT
CTCGCTTGTGGCTCTA
Downstream region at tRNA end position 
ctcatgaaaa
Secondary structure (Cloverleaf model)
>WENV170643712	Thr	CGT
                   a      TCTA ctcatgaaaa
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     A - T
                     A - T          T G
                    T     C G C T C     A
      T G A        A      | | | | |     A
    T       C T C G       G C G A G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     GGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A   C
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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