The detailed information of tRNA gene sequence


Sequence ID>WENV170643713
Genome IDJMBV01000215
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 3756
End posion on genome 3854
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aatcaatggg
tRNA gene sequence 
GGGGGTAGATGAGTCCTGGTGGGCTCTCTGGTCTTCAAAACCAGCACGAGGGGGGTTAGG
AGCCTCTTGGGTGGGTTCGATTCCCACATACTCCCGCCA
Downstream region at tRNA end position 
tagaatataa
Secondary structure (Cloverleaf model)
>WENV170643713	SeC(p)	TCA
                   g      GCCA tagaatataa
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     A - T
                     G   A          T T
                    A     C A C C C     A
      T C C        T      | | | | |     G
    G       T G A G       G T G G G     C
    G       + | | |                 T T
    T       G C T C
      G G          T     CACGAGGGGGGTTAGGAGCCTCTTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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