The detailed information of tRNA gene sequence


Sequence ID>WENV170643714
Genome IDJMBV01000226
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 13161
End posion on genome 13087
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tttcatttag
tRNA gene sequence 
GGGGTTGTAGCGCAGCGGGAGCGCGTTGCCTTCGCAAGGCAAAGGCCGTGGGTTCGAATC
CCATCAACTCCACCA
Downstream region at tRNA end position 
aaataaaaaa
Secondary structure (Cloverleaf model)
>WENV170643714	Ala	CGC
                   g      ACCA aaataaaaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     T - A
                     G - C          T A
                    T     T A C C C     A
        G A        A      + | | | |     G
      C     C G C G       G T G G G     C
      G     | | | |                 T T
      G     G C G C
        G A        G     AGGCC
                    T - A
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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