The detailed information of tRNA gene sequence


Sequence ID>WENV170643731
Genome IDJMBV01000289
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 6401
End posion on genome 6326
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aataaaacat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGTAAGTTCGAGT
CTTACCTCCGCAACTA
Downstream region at tRNA end position 
tcgaagaggg
Secondary structure (Cloverleaf model)
>WENV170643731	Met	CAT
                   t      ACTA tcgaagaggg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C A T T C     A
      T G A        G      | | | | |     G
    T       C G A G       G T A A G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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