The detailed information of tRNA gene sequence


Sequence ID>WENV170643736
Genome IDJMBV01000324
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 10032
End posion on genome 10120
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgttgaactt
tRNA gene sequence 
GGAGAGATGCCGGAGTGGTTGATCGGGGCGGTCTCGAAAACCGTTGTGGGACTTGTGCCC
ACCGTGGGTTCGAATCCCACTCTCTCCGCtg
Downstream region at tRNA end position 
attagggtgg
Secondary structure (Cloverleaf model)
>WENV170643736	Ser	CGA
                   t      GCtg attagggtgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    T       T C G G
      T G A        G     TGTGGGACTTGTGCCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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