The detailed information of tRNA gene sequence


Sequence ID>WENV170643747
Genome IDJMBV01000448
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 13055
End posion on genome 12973
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnggttacgg
tRNA gene sequence 
GGGGGTGTAGCGCAGTTTGGTAGCGCACGTGGTTTGGGACCATGGGGGGGCCGGGGGGGG
TTCAAATCCCTCCACCCCCCCGA
Downstream region at tRNA end position 
ccatactaaa
Secondary structure (Cloverleaf model)
>WENV170643747	Pro	TGG
                   g      CCGA ccatactaaa
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C G C G       G G G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGGGGCCGGG
                    C - G
                    G + T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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