The detailed information of tRNA gene sequence


Sequence ID>WENV170643748
Genome IDJMBV01000454
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1299
End posion on genome 1389
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tagcatatgt
tRNA gene sequence 
GGAGAGGTGGCTGAGTTGGCTGAAGGCGCTCGCCTGGAAAGCGGGTAAACGTGTGAGCGT
TTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttgttaaatt
Secondary structure (Cloverleaf model)
>WENV170643748	Ser	GGA
                   t      GCCA ttgttaaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G T C G       G A G G G     C
  G           + | |                 T T
  C         A G G C
    T G A          G     TAAACGTGTGAGCGTTTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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