The detailed information of tRNA gene sequence


Sequence ID>WENV170643753
Genome IDJMBV01000479
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 12396
End posion on genome 12319
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagcaatcaa
tRNA gene sequence 
GGGCCTTTAGCTCAGTCGGTTAGAGCGCCCGGCTCATAACCGGTAGGTCCGGGGGTTCGA
GTCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
tccctaaaat
Secondary structure (Cloverleaf model)
>WENV170643753	Met	CAT
                   a      ACCA tccctaaaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A        + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTCC
                    C   T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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