The detailed information of tRNA gene sequence


Sequence ID>WENV170643769
Genome IDJMBV01000648
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 4674
End posion on genome 4764
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taggtaattt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGATGAAGGCGCACGCCTGGAAAGCGTGTGTACGCCGAAAGCGT
ACCAAGGGTTCGAATCCCTTTCTCTCCGCAA
Downstream region at tRNA end position 
attaattttt
Secondary structure (Cloverleaf model)
>WENV170643769	Ser	GGA
                   t      GCAA attaattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       A A G G G     C
    G         | | |                 T T
    A       A G G C
      T G A        G     TGTACGCCGAAAGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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