The detailed information of tRNA gene sequence


Sequence ID>WENV170643783
Genome IDJMBV01000827
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 6140
End posion on genome 6213
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
agatcttccc
tRNA gene sequence 
GGGCGGATAGCTCAGTTGGTTAGAGCGTTTCTTTTACACAGAAGAGGTCGCAGGTTCGAG
TCCTGTTCTGCCCAttt
Downstream region at tRNA end position 
tttttctctg
Secondary structure (Cloverleaf model)
>WENV170643783	Val	TAC
                   c      Attt tttttctctg
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     G - C
                     A - T          T G
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    T - A
                    T - A
                    C - G
                    T - A
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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