The detailed information of tRNA gene sequence


Sequence ID>WENV170643789
Genome IDJMBV01000880
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 7348
End posion on genome 7249
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGAGTAGATGGGTGCTGGTGTGCCCTCTGGTCTTCAAAACCAGTATGAGGGGGGGTTAG
GAGCTTCTTGGGTGGGTTCGATTCCCACATACTCCCGCCA
Downstream region at tRNA end position 
tataagtaat
Secondary structure (Cloverleaf model)
>WENV170643789	SeC(p)	TCA
                   n      GCCA tataagtaat
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G   A          T T
                    A     C A C C C     A
      T C G        T      | | | | |     G
    G       T G G G       G T G G G     C
    G       + | | |                 T T
    T       G C C C
      G T          T     TATGAGGGGGGGTTAGGAGCTTCTTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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