The detailed information of tRNA gene sequence


Sequence ID>WENV170643792
Genome IDJMBV01000959
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 1401
End posion on genome 1494
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atgatatggg
tRNA gene sequence 
GGGGAGGTGCCAGAGTGGACGATTGGGGGGCCGCCTGCTAAGCGGTTGCCGGAGTAGAAT
TCGGCCCAGGGTTCGAATCCCTGCCTCCCCGCCT
Downstream region at tRNA end position 
tcaaaaactg
Secondary structure (Cloverleaf model)
>WENV170643792	Ser	GCT
                   g      GCCT tcaaaaactg
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
    G T G A        G      | | | | |     G
  G         G A C C       C A G G G     C
  A             | |                 T T
  C         G G G G
    G A T T        G     TGCCGGAGTAGAATTCGGCC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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